Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14940 and 14941 are separated by 275 nucleotides14941 and 14942 are separated by 320 nucleotides14942 and 14943 are separated by 483 nucleotides14943 and 14944 are separated by 453 nucleotides mRNA_6572: 14940 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928, at 1,131,312 to 1,136,542 14940 mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1,136,818 to 1,137,633 14941 mRNA_6574: 14942 - K18258 CRYM thiomorpholine-carboxylate dehydrogenase, at 1,137,954 to 1,139,326 14942 mRNA_6575: 14943 - KOG0440 Cell cycle-associated protein Mob1-1, at 1,139,810 to 1,140,979 14943 mRNA_6576: 14944 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 1,141,433 to 1,143,037 14944
Group Condition mRNA_6572 mRNA_6573 mRNA_6574 mRNA_6575 mRNA_6576
14940 14941 14942 14943 14944
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.3 N.D. -0.1
auxotrophy YNB Glucose +0.0 N.D. -0.5 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.4 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. -0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.2 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.0 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.2 N.D. +0.2
auxotrophy Dropout Complete +0.3 N.D. -0.6 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.5 N.D. +0.1
growth on oleic acid YNB Glucose -0.0 N.D. -0.1 N.D. +0.1
growth on ypd YPD -0.3 N.D. +0.3 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.3 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. +0.0 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.1 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.1 N.D. +0.1
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