Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14945 and 14946 are separated by 394 nucleotides14946 and 14947 are separated by 60 nucleotides14947 and 14948 are separated by 134 nucleotides14948 and 14949 are separated by 392 nucleotides mRNA_6577: 14945 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160, at 1,143,397 to 1,147,463 14945 mRNA_6578: 14946 - HMMPfam-pfkB family carbohydrate kinase-PF00294,SUPERFAMILY--SSF53613, at 1,147,858 to 1,149,094 14946 mRNA_6579: 14947 - KOG0871 Class 2 transcription repressor NC2, beta subunit (Dr1), at 1,149,155 to 1,149,894 14947 mRNA_6580: 14948 - K11098 SNRPF, SMF small nuclear ribonucleoprotein F, at 1,150,029 to 1,150,564 14948 mRNA_6581: 14949 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 1,150,957 to 1,153,150 14949
Group Condition mRNA_6577 mRNA_6578 mRNA_6579 mRNA_6580 mRNA_6581
14945 14946 14947 14948 14949
auxotrophy Dropout Complete +0.3 -0.8 N.D. N.D. -0.7
auxotrophy YNB Glucose +0.1 -0.5 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 N.D. N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.0 N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.1 N.D. N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.4 N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 N.D. N.D. -0.1
growth on ypd YPD -0.0 +0.4 N.D. N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.5 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.3 -0.3 N.D. N.D. +0.6
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.0 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 N.D. N.D. +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.3 +0.1 N.D. N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.0 N.D. N.D. +0.3
remove
mRNA_6577
plot		 remove
mRNA_6578
plot		 remove
mRNA_6579		 remove
mRNA_6580
plot		 remove
mRNA_6581
plot