Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14949 and 14950 are separated by 396 nucleotides14950 and 14951 are separated by 241 nucleotides14951 and 14952 are separated by 257 nucleotides14952 and 14953 are separated by 2494 nucleotides mRNA_6581: 14949 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 1,150,957 to 1,153,150 14949 mRNA_6582: 14950 - K11517 HAO (S)-2-hydroxy-acid oxidase, at 1,153,547 to 1,155,730 14950 mRNA_6583: 14951 - Hypothetical Protein, at 1,155,972 to 1,156,740 14951 mRNA_6584: 14952 - BLAST conserved fungal protein [Moniliophthora roreri M..., at 1,156,998 to 1,158,923 14952 mRNA_6585: 14953 - K14850 RRP8 ribosomal RNA-processing protein 8, at 1,161,418 to 1,162,965 14953
Group Condition mRNA_6581 mRNA_6582 mRNA_6583 mRNA_6584 mRNA_6585
14949 14950 14951 14952 14953
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 N.D. -1.5 -2.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.5 N.D. -1.8 -0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 N.D. -0.3 -0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.5 N.D. +0.5 -0.7
growth on ypd YPD -0.3 -0.1 N.D. -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.4 N.D. -0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 N.D. +0.0 -0.6
auxotrophy Dropout Complete -0.7 +0.8 N.D. -0.7 +0.5
growth on oleic acid YNB Glucose +0.6 -0.3 N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 N.D. +0.2 +0.2
auxotrophy YNB Glucose -0.0 +0.8 N.D. -0.4 -0.1
growth on oleic acid YNB Oleic Acid +0.3 +0.1 N.D. -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.1 N.D. +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.8 N.D. +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 +1.1 N.D. -0.5 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 N.D. -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 N.D. +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.1 N.D. +0.8 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 N.D. +0.7 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 N.D. +0.5 +0.3
growth on ricinoleic acid YNB Glucose +0.4 +0.3 N.D. +0.7 +0.1
remove
mRNA_6581
plot
remove
mRNA_6582
plot
remove
mRNA_6583
remove
mRNA_6584
plot
remove
mRNA_6585
plot