Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14953 and 14954 are separated by 219 nucleotides14954 and 14955 are separated by 1370 nucleotides14955 and 14956 are separated by 747 nucleotides14956 and 14957 are separated by 441 nucleotides mRNA_6585: 14953 - K14850 RRP8 ribosomal RNA-processing protein 8, at 1,161,418 to 1,162,965 14953 mRNA_6586: 14954 - SUPERFAMILY--SSF55729, at 1,163,185 to 1,164,579 14954 mRNA_6587: 14955 - SUPERFAMILY--SSF57184, at 1,165,950 to 1,167,130 14955 mRNA_6588: 14956 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 1,167,878 to 1,169,516 14956 mRNA_6589: 14957 - K12386 CTNS cystinosin, at 1,169,958 to 1,171,396 14957
Group Condition mRNA_6585 mRNA_6586 mRNA_6587 mRNA_6588 mRNA_6589
14953 14954 14955 14956 14957
ypd buoyancy 40 hrs No Buoyancy Separation -2.4 +0.8 -0.7 N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.2 -0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 +0.1 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.6 +0.2 -0.4 N.D. -0.2
growth on ypd YPD -0.4 -0.2 -0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.0 -0.5 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.2 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 -0.7 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 -0.2 N.D. -0.1
growth on oleic acid YNB Glucose -0.1 -0.2 +0.1 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.3 +0.3 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.2 N.D. -0.2
auxotrophy YNB Glucose -0.1 +0.3 -0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.3 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.1 -0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.2 -0.3 N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.6 -0.1 N.D. +0.2
auxotrophy Dropout Complete +0.5 +0.2 -0.2 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.6 +0.3 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.5 +0.3 N.D. +0.3
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