Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14955 and 14956 are separated by 747 nucleotides14956 and 14957 are separated by 441 nucleotides14957 and 14958 are separated by 456 nucleotides14958 and 14959 are separated by 604 nucleotides mRNA_6587: 14955 - SUPERFAMILY--SSF57184, at 1,165,950 to 1,167,130 14955 mRNA_6588: 14956 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 1,167,878 to 1,169,516 14956 mRNA_6589: 14957 - K12386 CTNS cystinosin, at 1,169,958 to 1,171,396 14957 mRNA_6590: 14958 - K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4, at 1,171,853 to 1,172,203 14958 mRNA_6591: 14959 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 1,172,808 to 1,176,820 14959
Group Condition mRNA_6587 mRNA_6588 mRNA_6589 mRNA_6590 mRNA_6591
14955 14956 14957 14958 14959
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.2 -1.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. -0.5 -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 N.D. -0.6 +0.7 -0.1
auxotrophy Dropout Complete -0.2 N.D. +0.3 -0.8 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 N.D. -0.2 +0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.3 -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.0 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.1 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.2 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. -0.2 +0.7 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.0 +0.3 -0.2
auxotrophy YNB Glucose -0.2 N.D. +0.1 +0.4 +0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.2 +0.2 +0.1
growth on ypd YPD -0.3 N.D. -0.0 +0.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.1 +0.7 +0.2
growth on oleic acid YNB Glucose +0.1 N.D. -0.0 +0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.2 +0.5 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. +0.3 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.2 +0.8 +0.0
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.2 +0.8 +0.4
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