Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14957 and 14958 are separated by 456 nucleotides14958 and 14959 are separated by 604 nucleotides14959 and 14960 are separated by 356 nucleotides14960 and 14961 are separated by 544 nucleotides mRNA_6589: 14957 - K12386 CTNS cystinosin, at 1,169,958 to 1,171,396 14957 mRNA_6590: 14958 - K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4, at 1,171,853 to 1,172,203 14958 mRNA_6591: 14959 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 1,172,808 to 1,176,820 14959 mRNA_6592: 14960 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1,177,177 to 1,181,389 14960 mRNA_6593: 14961 - KOG1616 Protein involved in Snf1 protein kinase complex assembly, at 1,181,934 to 1,184,760 14961
Group Condition mRNA_6589 mRNA_6590 mRNA_6591 mRNA_6592 mRNA_6593
14957 14958 14959 14960 14961
ypd buoyancy 40 hrs High Buoyancy -0.2 -1.3 +0.1 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.5 +0.2 -1.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.2 +0.1 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.3 -0.2 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.7 -0.1 -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 -0.0 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.1 +0.1 -0.1
growth on oleic acid YNB Glucose -0.0 +0.4 +0.1 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.6 -0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 +0.1 -0.5 +0.4
auxotrophy YNB Glucose +0.1 +0.4 +0.1 -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.5 +0.0 -0.6 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.8 +0.0 -0.1 -0.0
auxotrophy Dropout Complete +0.3 -0.8 +0.1 +0.2 +0.7
growth on ypd YPD -0.0 +0.9 -0.1 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.2 +0.4 -0.5 +0.7
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.7 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.7 +0.2 +0.2 +0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.2 +0.1 -0.2 +0.7
growth on oleic acid YNB Oleic Acid -0.2 +0.8 +0.4 +0.4 +0.1
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