Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14958 and 14959 are separated by 604 nucleotides14959 and 14960 are separated by 356 nucleotides14960 and 14961 are separated by 544 nucleotides14961 and 14962 are separated by 355 nucleotides mRNA_6590: 14958 - K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4, at 1,171,853 to 1,172,203 14958 mRNA_6591: 14959 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 1,172,808 to 1,176,820 14959 mRNA_6592: 14960 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1,177,177 to 1,181,389 14960 mRNA_6593: 14961 - KOG1616 Protein involved in Snf1 protein kinase complex assembly, at 1,181,934 to 1,184,760 14961 mRNA_6594: 14962 - Hypothetical Protein, at 1,185,116 to 1,185,583 14962
Group Condition mRNA_6590 mRNA_6591 mRNA_6592 mRNA_6593 mRNA_6594
14958 14959 14960 14961 14962
ypd buoyancy 40 hrs High Buoyancy -1.3 +0.1 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.2 -1.1 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.2 -0.2 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 -0.0 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 -0.5 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.0 -0.2 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.1 -0.4 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.1 -0.1 N.D.
growth on oleic acid YNB Glucose +0.4 +0.1 -0.6 +0.1 N.D.
auxotrophy Dropout Complete -0.8 +0.1 +0.2 +0.7 N.D.
auxotrophy YNB Glucose +0.4 +0.1 -0.5 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.1 -0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.0 -0.6 +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 -0.5 +0.7 N.D.
growth on ypd YPD +0.9 -0.1 -0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 +0.0 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.2 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.1 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.2 +0.2 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.8 +0.4 +0.4 +0.1 N.D.
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