Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14958 and 14959 are separated by 604 nucleotides
14959 and 14960 are separated by 356 nucleotides
14960 and 14961 are separated by 544 nucleotides
14961 and 14962 are separated by 355 nucleotides
mRNA_6590: 14958 - K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4, at 1,171,853 to 1,172,203
14958
mRNA_6591: 14959 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 1,172,808 to 1,176,820
14959
mRNA_6592: 14960 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1,177,177 to 1,181,389
14960
mRNA_6593: 14961 - KOG1616 Protein involved in Snf1 protein kinase complex assembly, at 1,181,934 to 1,184,760
14961
mRNA_6594: 14962 - Hypothetical Protein, at 1,185,116 to 1,185,583
14962
Group
Condition
mRNA
_6590
mRNA
_6591
mRNA
_6592
mRNA
_6593
mRNA
_6594
14958
14959
14960
14961
14962
ypd buoyancy
40 hrs High Buoyancy
-1.3
+0.1
-0.2
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.2
-1.1
+0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.2
-0.2
-0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.1
-0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
-0.0
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
-0.5
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.0
-0.2
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.1
-0.4
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
+0.1
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.4
+0.1
-0.6
+0.1
N.D.
auxotrophy
Dropout Complete
-0.8
+0.1
+0.2
+0.7
N.D.
auxotrophy
YNB Glucose
+0.4
+0.1
-0.5
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.1
-0.0
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.0
-0.6
+0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.4
-0.5
+0.7
N.D.
growth on ypd
YPD
+0.9
-0.1
-0.2
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
+0.0
-0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
-0.2
+0.7
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.7
+0.1
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.7
+0.2
+0.2
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.8
+0.4
+0.4
+0.1
N.D.
remove
mRNA_6590
plot
remove
mRNA_6591
plot
remove
mRNA_6592
remove
mRNA_6593
plot
remove
mRNA_6594
plot