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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14959 and 14960 are separated by 356 nucleotides
14960 and 14961 are separated by 544 nucleotides
14961 and 14962 are separated by 355 nucleotides
14962 and 14963 are separated by 533 nucleotides
mRNA_6591: 14959 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 1,172,808 to 1,176,820
14959
mRNA_6592: 14960 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1,177,177 to 1,181,389
14960
mRNA_6593: 14961 - KOG1616 Protein involved in Snf1 protein kinase complex assembly, at 1,181,934 to 1,184,760
14961
mRNA_6594: 14962 - Hypothetical Protein, at 1,185,116 to 1,185,583
14962
mRNA_6595: 14963 - Hypothetical Protein, at 1,186,117 to 1,188,115
14963
Group
Condition
mRNA
_6591
mRNA
_6592
mRNA
_6593
mRNA
_6594
mRNA
_6595
14959
14960
14961
14962
14963
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.4
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.2
-0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-1.1
+0.4
N.D.
+0.1
growth on ypd
YPD
-0.1
-0.2
-0.0
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.2
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
-0.1
N.D.
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.6
+0.1
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.6
+0.4
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.0
-0.0
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.1
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.5
+0.4
N.D.
-0.0
auxotrophy
YNB Glucose
+0.1
-0.5
+0.3
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.1
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.2
+0.1
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
-0.1
N.D.
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.5
+0.7
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.2
+0.7
N.D.
+0.2
auxotrophy
Dropout Complete
+0.1
+0.2
+0.7
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
+0.4
+0.4
+0.1
N.D.
+0.1
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