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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14967 and 14968 are separated by 1495 nucleotides
14968 and 14969 are separated by 783 nucleotides
14969 and 14970 are separated by 468 nucleotides
14970 and 14971 are separated by 416 nucleotides
mRNA_6599: 14967 - Hypothetical Protein, at 1,194,437 to 1,195,925
14967
mRNA_6600: 14968 - Hypothetical Protein, at 1,197,421 to 1,199,600
14968
mRNA_6601: 14969 - K04512 DAAM dishevelled associated activator of morphogenesis, at 1,200,384 to 1,206,346
14969
mRNA_6602: 14970 - K07953 SAR1 GTP-binding protein SAR1, at 1,206,815 to 1,208,411
14970
mRNA_6603: 14971 - K02149 ATPeV1D, ATP6M V-type H+-transporting ATPase subunit D, at 1,208,828 to 1,210,295
14971
Group
Condition
mRNA
_6599
mRNA
_6600
mRNA
_6601
mRNA
_6602
mRNA
_6603
14967
14968
14969
14970
14971
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.5
-0.6
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
-0.7
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.1
-0.5
N.D.
N.D.
auxotrophy
YNB Glucose
-0.2
-0.3
-0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.2
-0.3
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.5
+0.0
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.3
N.D.
N.D.
growth on ypd
YPD
-0.1
-0.3
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
+0.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.0
-0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.3
-0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
-0.2
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.4
+0.0
+0.3
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.4
+0.6
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
+0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.4
-0.3
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.0
N.D.
N.D.
auxotrophy
Dropout Complete
+0.0
+0.1
+0.1
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.2
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
+0.6
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.3
+0.0
N.D.
N.D.
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