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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14980 and 14981 are separated by 559 nucleotides
14981 and 14982 are separated by 474 nucleotides
14982 and 14983 are separated by 89 nucleotides
14983 and 14984 are separated by 320 nucleotides
mRNA_6612: 14980 - Hypothetical Protein, at 1,243,315 to 1,245,025
14980
mRNA_6613: 14981 - K08740 MSH4 DNA mismatch repair protein MSH4, at 1,245,585 to 1,249,013
14981
mRNA_6614: 14982 - HMMPfam-MRC1-like domain-PF09444, at 1,249,488 to 1,254,442
14982
mRNA_6615: 14983 - Hypothetical Protein, at 1,254,532 to 1,256,049
14983
mRNA_6616: 14984 - Hypothetical Protein, at 1,256,370 to 1,257,792
14984
Group
Condition
mRNA
_6612
mRNA
_6613
mRNA
_6614
mRNA
_6615
mRNA
_6616
14980
14981
14982
14983
14984
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.1
-1.6
-0.2
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.0
-0.1
-0.5
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.5
-1.0
-0.5
-0.7
auxotrophy
YNB Glucose
-0.1
-0.3
-1.0
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
-0.6
-0.1
-0.3
growth on oleic acid
YNB Glucose
+0.2
-0.2
-0.4
+0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
+0.4
+0.2
-0.7
auxotrophy
Dropout Complete
+0.3
-0.1
+0.1
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.3
-0.1
+0.3
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
-0.3
-0.3
+0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.1
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.0
-0.5
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.5
-0.0
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
+0.2
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.3
-0.0
+0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.0
+0.0
-0.3
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.6
+0.1
+0.3
-0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
-0.1
+0.6
+0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
+0.6
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.5
+0.3
+0.5
+0.2
growth on ypd
YPD
+0.3
-0.0
+0.4
+1.0
+0.6
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