Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14981 and 14982 are separated by 474 nucleotides
14982 and 14983 are separated by 89 nucleotides
14983 and 14984 are separated by 320 nucleotides
14984 and 14985 are separated by 239 nucleotides
mRNA_6613: 14981 - K08740 MSH4 DNA mismatch repair protein MSH4, at 1,245,585 to 1,249,013
14981
mRNA_6614: 14982 - HMMPfam-MRC1-like domain-PF09444, at 1,249,488 to 1,254,442
14982
mRNA_6615: 14983 - Hypothetical Protein, at 1,254,532 to 1,256,049
14983
mRNA_6616: 14984 - Hypothetical Protein, at 1,256,370 to 1,257,792
14984
mRNA_6617: 14985 - K15544 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72, at 1,258,032 to 1,259,206
14985
Group
Condition
mRNA
_6613
mRNA
_6614
mRNA
_6615
mRNA
_6616
mRNA
_6617
14981
14982
14983
14984
14985
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.1
-0.5
-1.3
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-1.0
-0.5
-0.7
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-1.6
-0.2
-1.0
+0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.6
-0.1
-0.3
-0.2
auxotrophy
YNB Glucose
-0.3
-1.0
+0.2
-0.3
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.4
+0.0
-0.2
-0.5
auxotrophy
Dropout Complete
-0.1
+0.1
-0.2
-0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.3
+0.1
-0.0
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.3
+0.0
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
+0.2
+0.3
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
+0.3
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.5
+0.3
+0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.4
+0.2
-0.7
+0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
-0.0
+0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.6
+0.1
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.2
+0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
+0.2
-0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.6
+0.1
+0.4
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.0
+0.3
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.3
+0.5
+0.2
+0.5
growth on ypd
YPD
-0.0
+0.4
+1.0
+0.6
+0.4
remove
mRNA_6613
plot
remove
mRNA_6614
plot
remove
mRNA_6615
remove
mRNA_6616
plot
remove
mRNA_6617
plot