Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14985 and 14986 are separated by 2015 nucleotides14986 and 14987 are separated by 1279 nucleotides14987 and 14988 are separated by 564 nucleotides14988 and 14989 are separated by 560 nucleotides mRNA_6617: 14985 - K15544 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72, at 1,258,032 to 1,259,206 14985 mRNA_6618: 14986 - KOG0627 Heat shock transcription factor, at 1,261,222 to 1,263,169 14986 mRNA_6619: 14987 - KOG0092 GTPase Rab5/YPT51 and related small G protein superfamily GTPases, at 1,264,449 to 1,266,706 14987 mRNA_6620: 14988 - K02935 RP-L7, MRPL12, rplL large subunit ribosomal protein L7/L12, at 1,267,271 to 1,267,860 14988 mRNA_6621: 14989 - Hypothetical Protein, at 1,268,421 to 1,270,121 14989
Group Condition mRNA_6617 mRNA_6618 mRNA_6619 mRNA_6620 mRNA_6621
14985 14986 14987 14988 14989
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 -0.2 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.3 N.D. -0.2
auxotrophy Dropout Complete -0.4 -0.2 -0.4 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.6 -0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 -0.2 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.2 -0.3 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 +0.2 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.0 -0.1 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.4 -0.0 N.D. -0.4
growth on oleic acid YNB Glucose -0.5 -0.1 +0.1 N.D. +0.2
auxotrophy YNB Glucose -0.1 -0.2 -0.3 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 -0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.3 -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 +0.1 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.0 +0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.0 +0.1 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.0 +0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.2 -0.3 N.D. +0.2
growth on ypd YPD +0.4 +0.3 +0.2 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.2 N.D. +0.3
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