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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14987 and 14988 are separated by 564 nucleotides
14988 and 14989 are separated by 560 nucleotides
14989 and 14990 are separated by 857 nucleotides
14990 and 14991 are separated by 467 nucleotides
mRNA_6619: 14987 - KOG0092 GTPase Rab5/YPT51 and related small G protein superfamily GTPases, at 1,264,449 to 1,266,706
14987
mRNA_6620: 14988 - K02935 RP-L7, MRPL12, rplL large subunit ribosomal protein L7/L12, at 1,267,271 to 1,267,860
14988
mRNA_6621: 14989 - Hypothetical Protein, at 1,268,421 to 1,270,121
14989
mRNA_6622: 14990 - Hypothetical Protein, at 1,270,979 to 1,271,740
14990
mRNA_6623: 14991 - Hypothetical Protein, at 1,272,208 to 1,273,680
14991
Group
Condition
mRNA
_6619
mRNA
_6620
mRNA
_6621
mRNA
_6622
mRNA
_6623
14987
14988
14989
14990
14991
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
-0.3
-0.5
-0.2
growth on ypd
YPD
+0.2
N.D.
-0.2
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
-0.3
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.2
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
-0.4
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
-0.3
-0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
-0.0
-0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
+0.0
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.3
+0.4
-0.1
auxotrophy
Dropout Complete
-0.4
N.D.
+0.2
+0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
-0.2
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
N.D.
-0.2
+0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.0
-0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.2
+0.8
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
+0.4
+0.4
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
+0.3
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+0.2
+0.4
+0.0
auxotrophy
YNB Glucose
-0.3
N.D.
+0.4
+0.2
+0.1
growth on oleic acid
YNB Glucose
+0.1
N.D.
+0.2
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.1
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
+0.3
+0.4
-0.3
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