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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14988 and 14989 are separated by 560 nucleotides
14989 and 14990 are separated by 857 nucleotides
14990 and 14991 are separated by 467 nucleotides
14991 and 14992 are separated by 320 nucleotides
mRNA_6620: 14988 - K02935 RP-L7, MRPL12, rplL large subunit ribosomal protein L7/L12, at 1,267,271 to 1,267,860
14988
mRNA_6621: 14989 - Hypothetical Protein, at 1,268,421 to 1,270,121
14989
mRNA_6622: 14990 - Hypothetical Protein, at 1,270,979 to 1,271,740
14990
mRNA_6623: 14991 - Hypothetical Protein, at 1,272,208 to 1,273,680
14991
mRNA_6624: 14992 - Hypothetical Protein, at 1,274,001 to 1,275,291
14992
Group
Condition
mRNA
_6620
mRNA
_6621
mRNA
_6622
mRNA
_6623
mRNA
_6624
14988
14989
14990
14991
14992
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
-0.1
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
-0.5
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.3
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-0.4
-0.2
-0.1
growth on ypd
YPD
N.D.
-0.2
-0.3
-0.5
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
-0.2
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.3
-0.1
+0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.0
-0.2
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
-0.5
-0.0
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+0.0
+0.1
-0.0
auxotrophy
Dropout Complete
N.D.
+0.2
+0.3
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.8
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.4
-0.1
+0.1
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.1
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
+0.0
+0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
+0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
+0.4
+0.0
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
+0.4
-0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.4
+0.4
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.2
+0.1
+0.0
auxotrophy
YNB Glucose
N.D.
+0.4
+0.2
+0.1
+0.1
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