Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14996 and 14997 are separated by 360 nucleotides14997 and 14998 are separated by 269 nucleotides14998 and 14999 are separated by 987 nucleotides14999 and 15000 are separated by 1505 nucleotides mRNA_6628: 14996 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1,284,165 to 1,286,987 14996 mRNA_6629: 14997 - KOG0538 Glycolate oxidase, at 1,287,348 to 1,288,864 14997 mRNA_6630: 14998 - KOG0463 GTP-binding protein GP-1, at 1,289,134 to 1,291,878 14998 mRNA_6631: 14999 - K11429 SUV420H histone-lysine N-methyltransferase SUV420H, at 1,292,866 to 1,293,273 14999 mRNA_6632: 15000 - BLAST histone-lysine N-methyltransferase SUV420H [Rhodo..., at 1,294,779 to 1,296,409 15000
Group Condition mRNA_6628 mRNA_6629 mRNA_6630 mRNA_6631 mRNA_6632
14996 14997 14998 14999 15000
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.3 -0.5 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.6 +0.1 -0.5 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 -0.1 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.7 -0.2 -0.3 -0.0
growth on ypd YPD +0.2 -0.4 +0.0 +0.0 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.4 -0.2 -0.2 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 +0.3 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 -0.4 -0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.0 +0.1 -0.1 +0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 -0.4 -0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 -0.1 -0.5 +0.2
growth on oleic acid YNB Glucose +0.1 +0.2 -0.2 -0.3 +0.1
auxotrophy Dropout Complete +0.1 +0.2 -0.2 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.0 -0.1 +0.1
auxotrophy YNB Glucose +0.1 +0.0 -0.3 +0.5 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.0 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.0 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.3 -0.3 +0.7 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 -0.2 +0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.6 -0.2 -0.3 +0.3
remove
mRNA_6628
plot
remove
mRNA_6629
plot
remove
mRNA_6630
remove
mRNA_6631
plot
remove
mRNA_6632
plot