Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14997 and 14998 are separated by 269 nucleotides
14998 and 14999 are separated by 987 nucleotides
14999 and 15000 are separated by 1505 nucleotides
15000 and 15001 are separated by 311 nucleotides
mRNA_6629: 14997 - KOG0538 Glycolate oxidase, at 1,287,348 to 1,288,864
14997
mRNA_6630: 14998 - KOG0463 GTP-binding protein GP-1, at 1,289,134 to 1,291,878
14998
mRNA_6631: 14999 - K11429 SUV420H histone-lysine N-methyltransferase SUV420H, at 1,292,866 to 1,293,273
14999
mRNA_6632: 15000 - BLAST histone-lysine N-methyltransferase SUV420H [Rhodo..., at 1,294,779 to 1,296,409
15000
mRNA_6633: 15001 - KOG1114 Tripeptidyl peptidase II, at 1,296,721 to 1,300,268
15001
Group
Condition
mRNA
_6629
mRNA
_6630
mRNA
_6631
mRNA
_6632
mRNA
_6633
14997
14998
14999
15000
15001
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.1
-0.5
-0.7
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.3
-0.5
-0.7
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
-0.2
-0.3
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
-0.2
-0.5
+0.1
growth on ypd
YPD
-0.4
+0.0
+0.0
-0.6
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.2
-0.2
-0.9
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.3
-0.1
-0.6
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
+0.0
-0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.4
-0.2
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
-0.2
-0.1
+0.1
auxotrophy
Dropout Complete
+0.2
-0.2
+0.1
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
+0.4
-0.2
-0.1
growth on oleic acid
YNB Glucose
+0.2
-0.2
-0.3
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.1
-0.5
+0.2
+0.1
auxotrophy
YNB Glucose
+0.0
-0.3
+0.5
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.1
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
-0.1
+0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.4
-0.3
+0.2
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-0.2
-0.3
+0.3
+0.0
growth on ricinoleic acid
YNB Glucose
+0.3
-0.3
+0.7
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.2
+0.3
+0.0
+0.1
remove
mRNA_6629
plot
remove
mRNA_6630
plot
remove
mRNA_6631
remove
mRNA_6632
plot
remove
mRNA_6633
plot