Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15000 and 15001 are separated by 311 nucleotides15001 and 15002 are separated by 656 nucleotides15002 and 15003 are separated by 356 nucleotides15003 and 15004 are separated by 187 nucleotides mRNA_6632: 15000 - BLAST histone-lysine N-methyltransferase SUV420H [Rhodo..., at 1,294,779 to 1,296,409 15000 mRNA_6633: 15001 - KOG1114 Tripeptidyl peptidase II, at 1,296,721 to 1,300,268 15001 mRNA_6634: 15002 - K02734 PSMB2 20S proteasome subunit beta 4, at 1,300,925 to 1,301,957 15002 mRNA_6635: 15003 - HMMPfam-Peptidase family M48-PF01435, at 1,302,314 to 1,305,791 15003 mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1,305,979 to 1,309,273 15004
Group Condition mRNA_6632 mRNA_6633 mRNA_6634 mRNA_6635 mRNA_6636
15000 15001 15002 15003 15004
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 +0.1 N.D. +0.1 N.D.
growth on ypd YPD -0.6 +0.0 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.1 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.6 +0.0 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 N.D. -0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.4 -0.1 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 N.D. -0.0 N.D.
auxotrophy Dropout Complete -0.3 +0.0 N.D. +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 N.D. -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.5 N.D. +0.2 N.D.
auxotrophy YNB Glucose -0.4 +0.2 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 N.D. +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 N.D. +0.4 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.0 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.4 N.D. +0.0 N.D.
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