Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15001 and 15002 are separated by 656 nucleotides15002 and 15003 are separated by 356 nucleotides15003 and 15004 are separated by 187 nucleotides15004 and 15005 are separated by 210 nucleotides mRNA_6633: 15001 - KOG1114 Tripeptidyl peptidase II, at 1,296,721 to 1,300,268 15001 mRNA_6634: 15002 - K02734 PSMB2 20S proteasome subunit beta 4, at 1,300,925 to 1,301,957 15002 mRNA_6635: 15003 - HMMPfam-Peptidase family M48-PF01435, at 1,302,314 to 1,305,791 15003 mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1,305,979 to 1,309,273 15004 mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1,309,484 to 1,313,910 15005
Group Condition mRNA_6633 mRNA_6634 mRNA_6635 mRNA_6636 mRNA_6637
15001 15002 15003 15004 15005
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.1 N.D. N.D.
growth on ypd YPD +0.0 N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.2 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.0 N.D. +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.3 N.D. N.D.
auxotrophy YNB Glucose +0.2 N.D. +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. +0.2 N.D. N.D.
remove
mRNA_6633
plot		 remove
mRNA_6634
plot		 remove
mRNA_6635		 remove
mRNA_6636
plot		 remove
mRNA_6637
plot