Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15002 and 15003 are separated by 356 nucleotides15003 and 15004 are separated by 187 nucleotides15004 and 15005 are separated by 210 nucleotides15005 and 15006 are separated by 223 nucleotides mRNA_6634: 15002 - K02734 PSMB2 20S proteasome subunit beta 4, at 1,300,925 to 1,301,957 15002 mRNA_6635: 15003 - HMMPfam-Peptidase family M48-PF01435, at 1,302,314 to 1,305,791 15003 mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1,305,979 to 1,309,273 15004 mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1,309,484 to 1,313,910 15005 mRNA_6638: 15006 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1,314,134 to 1,316,580 15006
Group Condition mRNA_6634 mRNA_6635 mRNA_6636 mRNA_6637 mRNA_6638
15002 15003 15004 15005 15006
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 N.D. N.D. -1.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 N.D. N.D. -0.9
auxotrophy Dropout Complete N.D. +0.2 N.D. N.D. -0.8
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 N.D. N.D. -0.5
growth on oleic acid YNB Glucose N.D. +0.2 N.D. N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 N.D. N.D. +0.0
auxotrophy YNB Glucose N.D. +0.3 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 N.D. N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 N.D. N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.2 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 N.D. N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 N.D. N.D. -0.0
growth on ypd YPD N.D. +0.1 N.D. N.D. +0.3
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