Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15009 and 15010 are separated by 199 nucleotides15010 and 15011 are separated by 204 nucleotides15011 and 15012 are separated by 408 nucleotides15012 and 15013 are separated by 1409 nucleotides mRNA_6641: 15009 - K11863 ATXN3, MJD Ataxin-3, at 1,326,359 to 1,327,984 15009 mRNA_6642: 15010 - KOG2684 Sirtuin 5 and related class III sirtuins (SIR2 family), at 1,328,184 to 1,330,070 15010 mRNA_6643: 15011 - KOG2983 Uncharacterized conserved protein, at 1,330,275 to 1,331,625 15011 mRNA_6644: 15012 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1,332,034 to 1,334,144 15012 mRNA_6645: 15013 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 1,335,554 to 1,337,313 15013
Group Condition mRNA_6641 mRNA_6642 mRNA_6643 mRNA_6644 mRNA_6645
15009 15010 15011 15012 15013
auxotrophy YNB Glucose -0.2 -0.7 N.D. -0.6 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.6 N.D. -0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 N.D. -0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.4 N.D. -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 N.D. -0.4 -0.0
growth on ricinoleic acid YNB Glucose -0.3 -0.1 N.D. -0.3 -0.0
growth on ypd YPD -0.4 +0.1 N.D. -0.1 -0.3
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 N.D. -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 N.D. -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.3 N.D. +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 N.D. -0.3 +0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.1 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 N.D. +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 N.D. +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.0 N.D. +0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 +0.5 N.D. +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.8 +0.4 N.D. +0.1 +0.3
remove
mRNA_6641
plot
remove
mRNA_6642
plot
remove
mRNA_6643
remove
mRNA_6644
plot
remove
mRNA_6645
plot