Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15011 and 15012 are separated by 408 nucleotides15012 and 15013 are separated by 1409 nucleotides15013 and 15014 are separated by 358 nucleotides15014 and 15015 are separated by 259 nucleotides mRNA_6643: 15011 - KOG2983 Uncharacterized conserved protein, at 1,330,275 to 1,331,625 15011 mRNA_6644: 15012 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1,332,034 to 1,334,144 15012 mRNA_6645: 15013 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 1,335,554 to 1,337,313 15013 mRNA_6646: 15014 - K14647 vpr minor extracellular serine protease Vpr, at 1,337,672 to 1,341,391 15014 mRNA_6647: 15015 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 1,341,651 to 1,342,937 15015
Group Condition mRNA_6643 mRNA_6644 mRNA_6645 mRNA_6646 mRNA_6647
15011 15012 15013 15014 15015
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.2 -0.1 -0.9
growth on oleic acid YNB Glucose N.D. -0.3 -0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.0 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.1 -0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.0 +0.0 -0.2
auxotrophy YNB Glucose N.D. -0.6 -0.3 -0.1 +0.2
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.0 -0.2 -0.1
growth on ypd YPD N.D. -0.1 -0.3 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.1 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.2 +0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 +0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.2 -0.4 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.1 -0.2 -0.5
auxotrophy Dropout Complete N.D. -0.2 -0.1 -0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.1 -0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -0.0 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.0 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.1 +0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.3 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.4 +0.0 +0.1
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