Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15012 and 15013 are separated by 1409 nucleotides15013 and 15014 are separated by 358 nucleotides15014 and 15015 are separated by 259 nucleotides15015 and 15016 are separated by 60 nucleotides mRNA_6644: 15012 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1,332,034 to 1,334,144 15012 mRNA_6645: 15013 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 1,335,554 to 1,337,313 15013 mRNA_6646: 15014 - K14647 vpr minor extracellular serine protease Vpr, at 1,337,672 to 1,341,391 15014 mRNA_6647: 15015 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 1,341,651 to 1,342,937 15015 mRNA_6648: 15016 - BLAST Gluconolactonase [Termitomyces sp. J132], at 1,342,998 to 1,344,316 15016
Group Condition mRNA_6644 mRNA_6645 mRNA_6646 mRNA_6647 mRNA_6648
15012 15013 15014 15015 15016
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 +0.0 -0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.1 -0.9 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.2 -0.6 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 -0.2 -0.5 -0.0
growth on ypd YPD -0.1 -0.3 +0.1 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.0 -0.2 -0.1 +0.1
growth on oleic acid YNB Glucose -0.3 -0.2 -0.3 -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 -0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 -0.4 -0.4 +0.1
auxotrophy YNB Glucose -0.6 -0.3 -0.1 +0.2 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.1 -0.5 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 -0.2 -0.5 +0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.2 +0.0 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.0 +0.0 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.1 +0.1 +0.2
auxotrophy Dropout Complete -0.2 -0.1 -0.2 +0.4 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 -0.2 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.2 +0.4 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.4 +0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.1 +0.4 +0.7
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