Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15021 and 15022 are separated by 278 nucleotides
15022 and 15023 are separated by 1383 nucleotides
15023 and 15024 are separated by 362 nucleotides
15024 and 15025 are separated by 1056 nucleotides
mRNA_6653: 15021 - K04739 PRKAR cAMP-dependent protein kinase regulator, at 1,354,178 to 1,355,889
15021
mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1,356,168 to 1,357,307
15022
mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1,358,691 to 1,359,757
15023
mRNA_6656: 15024 - KOG1674 Cyclin, at 1,360,120 to 1,362,447
15024
mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1,363,504 to 1,366,738
15025
Group
Condition
mRNA
_6653
mRNA
_6654
mRNA
_6655
mRNA
_6656
mRNA
_6657
15021
15022
15023
15024
15025
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
-0.2
-1.3
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.6
-0.1
-0.5
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-0.1
-0.5
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
-0.0
-1.2
+0.0
growth on ypd
YPD
N.D.
-0.1
-0.1
-0.5
-0.1
auxotrophy
YNB Glucose
N.D.
-0.4
+0.1
-0.6
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
+0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.8
+0.1
+0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.2
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.4
+0.1
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.4
+0.0
-0.4
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.2
-0.4
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
+0.0
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
+0.2
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.4
+0.2
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.5
+0.3
+0.4
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.3
-0.0
+0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.2
+0.2
+0.1
auxotrophy
Dropout Complete
N.D.
+0.1
+0.1
+0.3
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.1
+0.6
+0.2
remove
mRNA_6653
plot
remove
mRNA_6654
plot
remove
mRNA_6655
remove
mRNA_6656
plot
remove
mRNA_6657
plot