Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15022 and 15023 are separated by 1383 nucleotides15023 and 15024 are separated by 362 nucleotides15024 and 15025 are separated by 1056 nucleotides15025 and 15026 are separated by 160 nucleotides mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1,356,168 to 1,357,307 15022 mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1,358,691 to 1,359,757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1,360,120 to 1,362,447 15024 mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1,363,504 to 1,366,738 15025 mRNA_6658: 15026 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,366,899 to 1,370,407 15026
Group Condition mRNA_6654 mRNA_6655 mRNA_6656 mRNA_6657 mRNA_6658
15022 15023 15024 15025 15026
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -1.3 -0.1 -0.8
growth on ricinoleic acid YNB Glucose -0.6 -0.1 -0.5 +0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.0 -1.2 +0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.5 -0.2 -0.2
growth on ypd YPD -0.1 -0.1 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.1 +0.2 +0.3 -0.6
auxotrophy YNB Glucose -0.4 +0.1 -0.6 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.0 -0.4 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.3 +0.4 +0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 -0.1 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.0 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.2 +0.2 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.2 -0.4 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.0 -0.2 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.4 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.1 -0.1 +0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 +0.2 +0.1 +0.0
growth on oleic acid YNB Glucose +0.3 -0.0 +0.0 +0.2 +0.3
auxotrophy Dropout Complete +0.1 +0.1 +0.3 +0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.2 +0.1 +0.6 +0.2 +0.2
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