Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15035 and 15036 are separated by 698 nucleotides15036 and 15037 are separated by 168 nucleotides15037 and 15038 are separated by 341 nucleotides15038 and 15039 are separated by 828 nucleotides mRNA_6667: 15035 - Hypothetical Protein, at 1,397,904 to 1,402,835 15035 mRNA_6668: 15036 - K03509 POLH DNA polymerase eta, at 1,403,534 to 1,406,837 15036 mRNA_6669: 15037 - K03564 BCP, PRXQ, DOT5 peroxiredoxin Q/BCP, at 1,407,006 to 1,408,136 15037 mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1,408,478 to 1,409,380 15038 mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1,410,209 to 1,413,905 15039
Group Condition mRNA_6667 mRNA_6668 mRNA_6669 mRNA_6670 mRNA_6671
15035 15036 15037 15038 15039
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.3 -1.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.0 -0.9 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.1 -0.9 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.1 -0.7 -0.3
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 -0.5 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.3 -0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.2 -0.5 -0.6
auxotrophy YNB Glucose N.D. +0.1 -0.3 -0.5 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.0 -0.2 -0.2
auxotrophy Dropout Complete N.D. +0.1 -0.1 -0.6 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.2 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.2 +0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 +0.1 -0.1 -0.8
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.1 -0.1 -0.2
growth on ypd YPD N.D. -0.1 -0.0 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.0 +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 +0.3 +0.1 +0.1
remove
mRNA_6667
plot
remove
mRNA_6668
plot
remove
mRNA_6669
remove
mRNA_6670
plot
remove
mRNA_6671
plot