Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15037 and 15038 are separated by 341 nucleotides15038 and 15039 are separated by 828 nucleotides15039 and 15040 are separated by 318 nucleotides15040 and 15041 are separated by 586 nucleotides mRNA_6669: 15037 - K03564 BCP, PRXQ, DOT5 peroxiredoxin Q/BCP, at 1,407,006 to 1,408,136 15037 mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1,408,478 to 1,409,380 15038 mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1,410,209 to 1,413,905 15039 mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1,414,224 to 1,415,709 15040 mRNA_6673: 15041 - Hypothetical Protein, at 1,416,296 to 1,417,315 15041
Group Condition mRNA_6669 mRNA_6670 mRNA_6671 mRNA_6672 mRNA_6673
15037 15038 15039 15040 15041
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -1.0 -0.4 -0.1 +0.1
growth on oleic acid YNB Glucose -0.1 -0.5 -0.3 -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.9 -0.5 +0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.5 -0.2 -0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.7 -0.3 -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.9 -0.3 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.5 -0.6 -0.2 +0.1
auxotrophy YNB Glucose -0.3 -0.5 -0.2 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -0.8 -0.0 +0.1
auxotrophy Dropout Complete -0.1 -0.6 +0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 -0.2 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 -0.2 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.1 +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.4 -0.3 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.2 -0.2 +0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.4 -0.3 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.0 +0.1 +0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 +0.1 -0.4 +0.2
growth on ypd YPD -0.0 +0.2 -0.3 +0.7 +0.0
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