Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15039 and 15040 are separated by 318 nucleotides15040 and 15041 are separated by 586 nucleotides15041 and 15042 are separated by 714 nucleotides15042 and 15043 are separated by 27 nucleotides mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1,410,209 to 1,413,905 15039 mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1,414,224 to 1,415,709 15040 mRNA_6673: 15041 - Hypothetical Protein, at 1,416,296 to 1,417,315 15041 mRNA_6674: 15042 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1,418,030 to 1,419,199 15042 mRNA_6675: 15043 - Hypothetical Protein, at 1,419,227 to 1,419,845 15043
Group Condition mRNA_6671 mRNA_6672 mRNA_6673 mRNA_6674 mRNA_6675
15039 15040 15041 15042 15043
growth on oleic acid YNB Glucose -0.3 -0.4 -0.3 +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 +0.1 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 +0.1 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.0 +0.1 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.0 -0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 +0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.4 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.4 +0.2 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.2 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.0 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.1 -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.0 -0.0 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.1 -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 +0.2 +0.3 -0.1
auxotrophy Dropout Complete +0.0 -0.0 +0.0 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.0 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.1 +0.6 -0.1
auxotrophy YNB Glucose -0.2 +0.1 +0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.3 +0.0 +0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 +0.1 +0.8 +0.1
growth on ypd YPD -0.3 +0.7 +0.0 +1.0 -0.0
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