Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15040 and 15041 are separated by 586 nucleotides15041 and 15042 are separated by 714 nucleotides15042 and 15043 are separated by 27 nucleotides15043 and 15044 are separated by 126 nucleotides mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1,414,224 to 1,415,709 15040 mRNA_6673: 15041 - Hypothetical Protein, at 1,416,296 to 1,417,315 15041 mRNA_6674: 15042 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1,418,030 to 1,419,199 15042 mRNA_6675: 15043 - Hypothetical Protein, at 1,419,227 to 1,419,845 15043 mRNA_6676: 15044 - KOG3138 Predicted N-acetyltransferase, at 1,419,972 to 1,420,806 15044
Group Condition mRNA_6672 mRNA_6673 mRNA_6674 mRNA_6675 mRNA_6676
15040 15041 15042 15043 15044
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 -0.2 +0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.2 -0.5 +0.0 -0.1
growth on oleic acid YNB Glucose -0.4 -0.3 +0.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 -0.2 +0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.0 -0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 -0.3 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 -0.3 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.2 -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 -0.1 +0.0 +0.2
auxotrophy Dropout Complete -0.0 +0.0 +0.2 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 +0.3 -0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.0 +0.1 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.0 +0.3 -0.1 -0.1
auxotrophy YNB Glucose +0.1 +0.1 +0.5 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.6 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.8 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.0 +0.9 -0.2 +0.6
growth on ypd YPD +0.7 +0.0 +1.0 -0.0 -0.1
remove
mRNA_6672
plot
remove
mRNA_6673
plot
remove
mRNA_6674
remove
mRNA_6675
plot
remove
mRNA_6676
plot