Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15044 and 15045 are separated by 369 nucleotides15045 and 15046 are separated by 392 nucleotides15046 and 15047 are separated by 240 nucleotides15047 and 15048 are separated by 389 nucleotides mRNA_6676: 15044 - KOG3138 Predicted N-acetyltransferase, at 1,419,972 to 1,420,806 15044 mRNA_6677: 15045 - Hypothetical Protein, at 1,421,176 to 1,421,967 15045 mRNA_6678: 15046 - KOG2533 Permease of the major facilitator superfamily, at 1,422,360 to 1,424,349 15046 mRNA_6679: 15047 - K05389 KCNKF potassium channel subfamily K, other eukaryote, at 1,424,590 to 1,427,114 15047 mRNA_6680: 15048 - K11430 EZH2 histone-lysine N-methyltransferase EZH2, at 1,427,504 to 1,431,076 15048
Group Condition mRNA_6676 mRNA_6677 mRNA_6678 mRNA_6679 mRNA_6680
15044 15045 15046 15047 15048
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -1.8 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.8 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.5 -0.8 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.9 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 -1.2 -0.2 +0.0
auxotrophy YNB Glucose -0.0 -0.2 -0.8 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 -0.9 -0.1 -0.2
auxotrophy Dropout Complete -0.1 -0.3 -0.8 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 -1.1 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -0.6 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.4 -0.7 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.4 -0.5 -0.2 -0.0
growth on ricinoleic acid YNB Glucose +0.2 +0.3 -0.5 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.5 +0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 +0.1 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.1 +0.1 -0.1
growth on ypd YPD -0.1 -0.1 -0.0 -0.0 +0.1
growth on oleic acid YNB Glucose -0.1 +0.5 -0.3 +0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.0 +0.2 -0.4 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.0 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 +0.1 +0.3 +0.4
remove
mRNA_6676
plot
remove
mRNA_6677
plot
remove
mRNA_6678
remove
mRNA_6679
plot
remove
mRNA_6680
plot