Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15048 and 15049 are separated by 735 nucleotides
15049 and 15050 are separated by 1002 nucleotides
15050 and 15051 are separated by 207 nucleotides
15051 and 15052 are separated by 166 nucleotides
mRNA_6680: 15048 - K11430 EZH2 histone-lysine N-methyltransferase EZH2, at 1,427,504 to 1,431,076
15048
mRNA_6681: 15049 - Hypothetical Protein, at 1,431,812 to 1,432,661
15049
mRNA_6682: 15050 - HMMPfam-Roadblock/LC7 domain-PF03259,SMART-Roadblock/LC7 domain-SM00960,SUPERFAMILY--SSF103196, at 1,433,664 to 1,434,403
15050
mRNA_6683: 15051 - HMMPfam-Thioesterase-like superfamily-PF13622, at 1,434,611 to 1,435,976
15051
mRNA_6684: 15052 - K04464 MAPK7 mitogen-activated protein kinase 7, at 1,436,143 to 1,438,277
15052
Group
Condition
mRNA
_6680
mRNA
_6681
mRNA
_6682
mRNA
_6683
mRNA
_6684
15048
15049
15050
15051
15052
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.0
N.D.
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
N.D.
-0.3
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.9
N.D.
+0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.2
N.D.
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
N.D.
-0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
N.D.
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.2
N.D.
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
N.D.
-0.5
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
N.D.
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
N.D.
+0.0
-0.3
growth on oleic acid
YNB Glucose
-0.2
+0.4
N.D.
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
N.D.
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.4
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose
-0.1
-0.0
N.D.
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
N.D.
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
N.D.
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.3
N.D.
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
+0.0
+0.3
N.D.
-0.3
-0.1
growth on ypd
YPD
+0.1
+0.3
N.D.
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.4
N.D.
-0.1
-0.0
auxotrophy
Dropout Complete
-0.0
+0.3
N.D.
-0.0
+0.2
remove
mRNA_6680
plot
remove
mRNA_6681
plot
remove
mRNA_6682
remove
mRNA_6683
plot
remove
mRNA_6684
plot