Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15051 and 15052 are separated by 166 nucleotides
15052 and 15053 are separated by 420 nucleotides
15053 and 15054 are separated by 484 nucleotides
15054 and 15055 are separated by 430 nucleotides
mRNA_6683: 15051 - HMMPfam-Thioesterase-like superfamily-PF13622, at 1,434,611 to 1,435,976
15051
mRNA_6684: 15052 - K04464 MAPK7 mitogen-activated protein kinase 7, at 1,436,143 to 1,438,277
15052
mRNA_6685: 15053 - Hypothetical Protein, at 1,438,698 to 1,439,183
15053
mRNA_6686: 15054 - K02875 RP-L14e, RPL14 large subunit ribosomal protein L14e, at 1,439,668 to 1,440,386
15054
mRNA_6687: 15055 - BLAST Wings apart-like protein [Xanthophyllomyces dendrorhous], at 1,440,817 to 1,442,910
15055
Group
Condition
mRNA
_6683
mRNA
_6684
mRNA
_6685
mRNA
_6686
mRNA
_6687
15051
15052
15053
15054
15055
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.3
-0.0
N.D.
-0.4
growth on ricinoleic acid
YNB Glucose
-0.5
+0.2
-0.3
N.D.
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
+0.5
N.D.
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.4
+0.4
N.D.
-0.4
growth on oleic acid
YNB Glucose
-0.5
-0.0
-0.4
N.D.
+0.2
auxotrophy
Dropout Complete
-0.0
+0.2
-0.7
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.0
-0.7
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.4
-0.1
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
+0.8
N.D.
-0.7
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
-0.1
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.0
-0.2
N.D.
+0.4
growth on ypd
YPD
+0.0
-0.3
+0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
-0.0
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.0
-0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
-0.2
N.D.
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
+0.2
N.D.
+0.5
auxotrophy
YNB Glucose
-0.1
-0.0
-0.2
N.D.
+0.6
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
+0.2
N.D.
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
+0.3
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.0
+0.2
N.D.
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.1
+0.4
N.D.
+0.8
remove
mRNA_6683
plot
remove
mRNA_6684
plot
remove
mRNA_6685
remove
mRNA_6686
plot
remove
mRNA_6687
plot