Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15073 and 15074 are separated by 1860 nucleotides15074 and 15075 are separated by 199 nucleotides15075 and 15076 are separated by 823 nucleotides15076 and 15077 are separated by 165 nucleotides mRNA_6705: 15073 - K11227 PBS2 mitogen-activated protein kinase kinase, at 1,492,601 to 1,495,154 15073 mRNA_6706: 15074 - K16261 YAT yeast amino acid transporter, at 1,497,015 to 1,499,228 15074 mRNA_6707: 15075 - KOG3750 Inositol phospholipid synthesis protein, Scs3p, at 1,499,428 to 1,503,895 15075 mRNA_6708: 15076 - KOG3743 Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5), at 1,504,719 to 1,508,015 15076 mRNA_6709: 15077 - BLAST recombination signal binding protein-J kappa [Kal..., at 1,508,181 to 1,509,469 15077
Group Condition mRNA_6705 mRNA_6706 mRNA_6707 mRNA_6708 mRNA_6709
15073 15074 15075 15076 15077
auxotrophy YNB Glucose 75mM Methionine N.D. -1.2 -0.4 -0.0 +0.3
auxotrophy YNB Glucose N.D. -1.0 -0.3 +0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.8 -0.4 -0.1 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 +0.2 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.2 -0.1 -0.6
growth on oleic acid YNB Glucose N.D. -0.1 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.2 -0.1 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.1 -0.1 +0.1
auxotrophy Dropout Complete N.D. -0.7 -0.4 +0.3 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 -0.3 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.2 +0.0 -0.1
growth on ypd YPD N.D. -0.4 -0.1 -0.1 +0.7
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 -0.0 +0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.1 -0.1 +0.5
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.0 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.0 +0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.9 -0.2 -0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.7 -0.1 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.8 -0.0 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +1.0 -0.1 +0.3 +0.4
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