Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15076 and 15077 are separated by 165 nucleotides15077 and 15078 are separated by 1103 nucleotides15078 and 15079 are separated by 550 nucleotides15079 and 15080 are separated by 1028 nucleotides mRNA_6708: 15076 - KOG3743 Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5), at 1,504,719 to 1,508,015 15076 mRNA_6709: 15077 - BLAST recombination signal binding protein-J kappa [Kal..., at 1,508,181 to 1,509,469 15077 mRNA_6710: 15078 - SUPERFAMILY--SSF50685, at 1,510,573 to 1,512,987 15078 mRNA_6711: 15079 - Hypothetical Protein, at 1,513,538 to 1,514,008 15079 mRNA_6712: 15080 - Hypothetical Protein, at 1,515,037 to 1,516,123 15080
Group Condition mRNA_6708 mRNA_6709 mRNA_6710 mRNA_6711 mRNA_6712
15076 15077 15078 15079 15080
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 +0.3 -0.4 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.3 -1.0 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.2 -0.0 -0.2
growth on ypd YPD -0.1 +0.7 +0.3 -0.6 -0.0
growth on oleic acid YNB Glucose -0.1 -0.0 +0.4 -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.4 -0.2 +0.6 -0.5
auxotrophy YNB Glucose +0.0 +0.4 +0.3 +0.6 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 +0.4 +0.7 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.1 +0.3 -0.2 +0.8
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.6 -0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.4 -0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 +0.0 +0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.3 +0.7 +0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 +0.7 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.6 +0.4 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.5 +0.3 -0.1 +0.8
growth on ricinoleic acid YNB Glucose -0.1 +0.5 +0.2 +0.1 +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.3 +0.3 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 +0.7 +0.6 +0.5
auxotrophy Dropout Complete +0.3 +0.7 +0.3 +0.6 +0.1
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