Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15076 and 15077 are separated by 165 nucleotides
15077 and 15078 are separated by 1103 nucleotides
15078 and 15079 are separated by 550 nucleotides
15079 and 15080 are separated by 1028 nucleotides
mRNA_6708: 15076 - KOG3743 Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5), at 1,504,719 to 1,508,015
15076
mRNA_6709: 15077 - BLAST recombination signal binding protein-J kappa [Kal..., at 1,508,181 to 1,509,469
15077
mRNA_6710: 15078 - SUPERFAMILY--SSF50685, at 1,510,573 to 1,512,987
15078
mRNA_6711: 15079 - Hypothetical Protein, at 1,513,538 to 1,514,008
15079
mRNA_6712: 15080 - Hypothetical Protein, at 1,515,037 to 1,516,123
15080
Group
Condition
mRNA
_6708
mRNA
_6709
mRNA
_6710
mRNA
_6711
mRNA
_6712
15076
15077
15078
15079
15080
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.6
+0.3
-0.4
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.3
-1.0
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
-0.2
-0.0
-0.2
growth on ypd
YPD
-0.1
+0.7
+0.3
-0.6
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.0
+0.4
-0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.4
-0.2
+0.6
-0.5
auxotrophy
YNB Glucose
+0.0
+0.4
+0.3
+0.6
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.3
+0.4
+0.7
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
+0.3
-0.2
+0.8
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.6
-0.1
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.4
-0.1
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
+0.0
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.3
+0.7
+0.4
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.5
+0.7
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
+0.6
+0.4
+0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.5
+0.3
-0.1
+0.8
growth on ricinoleic acid
YNB Glucose
-0.1
+0.5
+0.2
+0.1
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
+0.3
+0.3
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.4
+0.7
+0.6
+0.5
auxotrophy
Dropout Complete
+0.3
+0.7
+0.3
+0.6
+0.1
remove
mRNA_6708
plot
remove
mRNA_6709
plot
remove
mRNA_6710
remove
mRNA_6711
plot
remove
mRNA_6712
plot