Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15078 and 15079 are separated by 550 nucleotides15079 and 15080 are separated by 1028 nucleotides15080 and 15081 are separated by 444 nucleotides15081 and 15082 are separated by 929 nucleotides mRNA_6710: 15078 - SUPERFAMILY--SSF50685, at 1,510,573 to 1,512,987 15078 mRNA_6711: 15079 - Hypothetical Protein, at 1,513,538 to 1,514,008 15079 mRNA_6712: 15080 - Hypothetical Protein, at 1,515,037 to 1,516,123 15080 mRNA_6713: 15081 - HMMPfam-RTA1 like protein-PF04479, at 1,516,568 to 1,518,041 15081 mRNA_6714: 15082 - HMMPfam-Inhibitor of Apoptosis domain-PF00653,ProSiteProfiles-BIR repeat profile.-PS50143,SMART-Baculoviral inhibition of apoptosis protein repeat-SM00238,SUPERFAMILY--SSF57924, at 1,518,971 to 1,519,735 15082
Group Condition mRNA_6710 mRNA_6711 mRNA_6712 mRNA_6713 mRNA_6714
15078 15079 15080 15081 15082
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.4 -0.9 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.2 -0.3 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.2 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.0 -0.1 N.D.
growth on ypd YPD +0.3 -0.6 -0.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.6 -0.5 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.7 -0.5 -0.1 N.D.
auxotrophy YNB Glucose +0.3 +0.6 -0.5 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.5 +0.1 +0.2 N.D.
growth on oleic acid YNB Glucose +0.4 -0.1 +0.4 +0.2 N.D.
auxotrophy Dropout Complete +0.3 +0.6 +0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.4 -0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.4 +0.1 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.7 +0.5 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 +0.8 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.6 -0.1 +0.4 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.2 +0.8 +0.4 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.9 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.3 +0.7 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +0.6 +0.5 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.4 +0.8 +0.3 N.D.
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