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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15080 and 15081 are separated by 444 nucleotides
15081 and 15082 are separated by 929 nucleotides
15082 and 15083 are separated by 1958 nucleotides
15083 and 15084 are separated by 265 nucleotides
mRNA_6712: 15080 - Hypothetical Protein, at 1,515,037 to 1,516,123
15080
mRNA_6713: 15081 - HMMPfam-RTA1 like protein-PF04479, at 1,516,568 to 1,518,041
15081
mRNA_6714: 15082 - HMMPfam-Inhibitor of Apoptosis domain-PF00653,ProSiteProfiles-BIR repeat profile.-PS50143,SMART-Baculoviral inhibition of apoptosis protein repeat-SM00238,SUPERFAMILY--SSF57924, at 1,518,971 to 1,519,735
15082
mRNA_6715: 15083 - K13989 DERL2_3 Derlin-2/3, at 1,521,694 to 1,522,877
15083
mRNA_6716: 15084 - Hypothetical Protein, at 1,523,143 to 1,524,181
15084
Group
Condition
mRNA
_6712
mRNA
_6713
mRNA
_6714
mRNA
_6715
mRNA
_6716
15080
15081
15082
15083
15084
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.1
N.D.
-0.4
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.9
+0.0
N.D.
+0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.1
N.D.
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
N.D.
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.0
N.D.
-0.0
-0.4
auxotrophy
Dropout Complete
+0.1
-0.1
N.D.
-0.0
-0.6
growth on oleic acid
YNB Glucose
+0.4
+0.2
N.D.
-0.4
-0.6
auxotrophy
YNB Glucose
-0.5
+0.3
N.D.
-0.0
-0.0
growth on oleic acid
YNB Oleic Acid
+0.4
+0.2
N.D.
-0.4
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
N.D.
+0.2
+0.1
growth on ypd
YPD
-0.0
+0.1
N.D.
+0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.2
N.D.
+0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
N.D.
+0.0
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.4
N.D.
+0.1
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
N.D.
+0.2
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.8
+0.1
N.D.
+0.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
+0.4
N.D.
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.9
+0.2
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.3
N.D.
+0.4
+0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
+0.3
N.D.
+0.1
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.4
N.D.
+0.3
+0.8
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