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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15084 and 15085 are separated by 415 nucleotides
15085 and 15086 are separated by 1322 nucleotides
15086 and 15087 are separated by 994 nucleotides
15087 and 15088 are separated by 759 nucleotides
mRNA_6716: 15084 - Hypothetical Protein, at 1,523,143 to 1,524,181
15084
mRNA_6717: 15085 - Hypothetical Protein, at 1,524,597 to 1,524,959
15085
mRNA_6718: 15086 - K13711 PI4K2 phosphatidylinositol 4-kinase type 2, at 1,526,282 to 1,529,015
15086
mRNA_6719: 15087 - Hypothetical Protein, at 1,530,010 to 1,530,905
15087
mRNA_6720: 15088 - K11293 HIRA, HIR1 protein HIRA/HIR1, at 1,531,665 to 1,535,330
15088
Group
Condition
mRNA
_6716
mRNA
_6717
mRNA
_6718
mRNA
_6719
mRNA
_6720
15084
15085
15086
15087
15088
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
N.D.
+0.4
+0.2
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
+0.2
+0.2
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.4
N.D.
+0.1
-0.0
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
+0.1
-0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
+0.0
+0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
+0.1
-0.4
-0.6
auxotrophy
Dropout Complete
-0.6
N.D.
+0.1
+0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
N.D.
+0.3
+0.5
-0.9
auxotrophy
YNB Glucose
-0.0
N.D.
+0.0
-0.1
-0.4
growth on oleic acid
YNB Oleic Acid
-0.5
N.D.
+0.1
+0.1
-0.2
growth on oleic acid
YNB Glucose
-0.6
N.D.
-0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
+0.2
+0.1
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
+0.1
-0.1
-0.6
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
+0.2
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
N.D.
+0.2
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
N.D.
+0.2
-0.4
-0.3
growth on ypd
YPD
-0.1
N.D.
+0.1
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
N.D.
+0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
N.D.
+0.1
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.2
+0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.4
N.D.
+0.1
+0.2
+0.3
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