Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15088 and 15089 are separated by 123 nucleotides15089 and 15090 are separated by 339 nucleotides15090 and 15091 are separated by 872 nucleotides15091 and 15092 are separated by 92 nucleotides mRNA_6720: 15088 - K11293 HIRA, HIR1 protein HIRA/HIR1, at 1,531,665 to 1,535,330 15088 mRNA_6721: 15089 - K14554 UTP21, WDR36 U3 small nucleolar RNA-associated protein 21, at 1,535,454 to 1,538,954 15089 mRNA_6722: 15090 - K17908 WIPI, ATG18 autophagy-related protein 18, at 1,539,294 to 1,541,156 15090 mRNA_6723: 15091 - K01078 E3.1.3.2 acid phosphatase, at 1,542,029 to 1,544,062 15091 mRNA_6724: 15092 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,544,155 to 1,546,536 15092
Group Condition mRNA_6720 mRNA_6721 mRNA_6722 mRNA_6723 mRNA_6724
15088 15089 15090 15091 15092
facs on lipid accumulation Sorted High BODIPY Gate -0.7 N.D. -1.6 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -1.3 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 N.D. -1.1 +0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. -0.4 -0.7 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.2 N.D. -0.6 +0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.7 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. -1.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -1.2 +0.3 -0.0
growth on oleic acid YNB Oleic Acid -0.2 N.D. -1.2 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. -0.5 +0.1 +0.1
auxotrophy YNB Glucose -0.4 N.D. -0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. -0.2 -0.1 +0.0
auxotrophy Dropout Complete -0.2 N.D. -0.2 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. -0.0 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. +0.4 +0.0 +0.1
growth on oleic acid YNB Glucose +0.3 N.D. -0.8 +0.1 +0.1
growth on ypd YPD +0.2 N.D. -0.0 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.2 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.7 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.6 +0.4 +0.0
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