Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15088 and 15089 are separated by 123 nucleotides
15089 and 15090 are separated by 339 nucleotides
15090 and 15091 are separated by 872 nucleotides
15091 and 15092 are separated by 92 nucleotides
mRNA_6720: 15088 - K11293 HIRA, HIR1 protein HIRA/HIR1, at 1,531,665 to 1,535,330
15088
mRNA_6721: 15089 - K14554 UTP21, WDR36 U3 small nucleolar RNA-associated protein 21, at 1,535,454 to 1,538,954
15089
mRNA_6722: 15090 - K17908 WIPI, ATG18 autophagy-related protein 18, at 1,539,294 to 1,541,156
15090
mRNA_6723: 15091 - K01078 E3.1.3.2 acid phosphatase, at 1,542,029 to 1,544,062
15091
mRNA_6724: 15092 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,544,155 to 1,546,536
15092
Group
Condition
mRNA
_6720
mRNA
_6721
mRNA
_6722
mRNA
_6723
mRNA
_6724
15088
15089
15090
15091
15092
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
N.D.
-1.6
-0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
N.D.
-1.3
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
N.D.
-1.1
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
N.D.
-0.4
-0.7
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
N.D.
-0.6
+0.2
+0.0
growth on ricinoleic acid
YNB Glucose
-0.4
N.D.
-0.7
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
N.D.
-1.1
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
N.D.
-1.2
+0.3
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
-1.2
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
N.D.
-0.5
+0.1
+0.1
auxotrophy
YNB Glucose
-0.4
N.D.
-0.2
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.5
N.D.
-0.2
-0.1
+0.0
auxotrophy
Dropout Complete
-0.2
N.D.
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.5
N.D.
-0.0
-0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
N.D.
+0.4
+0.0
+0.1
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.8
+0.1
+0.1
growth on ypd
YPD
+0.2
N.D.
-0.0
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
+0.2
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
+0.4
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+0.7
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
+0.6
+0.4
+0.0
remove
mRNA_6720
plot
remove
mRNA_6721
plot
remove
mRNA_6722
remove
mRNA_6723
plot
remove
mRNA_6724
plot