Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15090 and 15091 are separated by 872 nucleotides15091 and 15092 are separated by 92 nucleotides mRNA_6722: 15090 - K17908 WIPI, ATG18 autophagy-related protein 18, at 1,539,294 to 1,541,156 15090 mRNA_6723: 15091 - K01078 E3.1.3.2 acid phosphatase, at 1,542,029 to 1,544,062 15091 mRNA_6724: 15092 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,544,155 to 1,546,536 15092
Group Condition mRNA_6722 mRNA_6723 mRNA_6724
15090 15091 15092
facs on lipid accumulation Sorted High BODIPY Gate -1.6 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -1.2 +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 +0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.7 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.2 +0.3 -0.0
growth on oleic acid YNB Glucose -0.8 +0.1 +0.1
auxotrophy Dropout Complete -0.2 -0.1 -0.1
auxotrophy YNB Glucose -0.2 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 +0.0
growth on ypd YPD -0.0 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.4 +0.0
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