Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15094 and 15095 are separated by 156 nucleotides15095 and 15096 are separated by 343 nucleotides15096 and 15097 are separated by 291 nucleotides15097 and 15098 are separated by 589 nucleotides mRNA_6726: 15094 - Hypothetical Protein, at 1,736 to 3,438 15094 mRNA_6727: 15095 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 3,595 to 4,704 15095 mRNA_6728: 15096 - K14309 NUP93, NIC96 nuclear pore complex protein Nup93, at 5,048 to 8,579 15096 mRNA_6729: 15097 - HMMPfam-Putative GTPase activating protein for Arf-PF01412,PRINTS-HIV Rev interacting protein signature-PR00405,ProSiteProfiles-ARF GTPase-activating proteins domain profile.-PS50115,SMART-Putative GTP-ase activating proteins for the small GTPase, ARF-SM00105,SUPERFAMILY--SSF57863, at 8,871 to 11,490 15097 mRNA_6730: 15098 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 12,080 to 14,125 15098
Group Condition mRNA_6726 mRNA_6727 mRNA_6728 mRNA_6729 mRNA_6730
15094 15095 15096 15097 15098
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.6 -2.3 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -1.4 -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.4 -0.8 -0.5 -0.2
auxotrophy Dropout Complete +0.2 -0.4 -0.7 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 -1.3 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.6 -0.3 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 -0.8 -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.5 -0.3 +0.1 -0.2
auxotrophy YNB Glucose +0.1 -0.2 -0.1 -0.2 -0.2
growth on oleic acid YNB Glucose -0.0 -0.1 -0.3 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.6 +0.1 +0.3 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.3 +0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.1 -0.8 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 -0.4 +0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.4 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.4 +0.4 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.1 +0.6 +0.2
growth on ypd YPD +0.2 +0.2 +0.9 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 -0.0 +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.6 +0.4 +0.1 +0.3
remove
mRNA_6726
plot
remove
mRNA_6727
plot
remove
mRNA_6728
remove
mRNA_6729
plot
remove
mRNA_6730
plot