Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15111 and 15112 are separated by 127 nucleotides15112 and 15113 are separated by 107 nucleotides15113 and 15114 are separated by 117 nucleotides15114 and 15115 are separated by 146 nucleotides mRNA_6743: 15111 - K06671 STAG1_2, SCC3, IRR1 cohesin complex subunit SA-1/2, at 41,896 to 46,673 15111 mRNA_6744: 15112 - KOG0813 Glyoxylase, at 46,801 to 48,312 15112 mRNA_6745: 15113 - HMMPfam-Uncharacterised conserved protein (DUF2315)-PF10231, at 48,420 to 49,672 15113 mRNA_6746: 15114 - KOG3381 Uncharacterized conserved protein, at 49,790 to 50,693 15114 mRNA_6747: 15115 - Hypothetical Protein, at 50,840 to 52,306 15115
Group Condition mRNA_6743 mRNA_6744 mRNA_6745 mRNA_6746 mRNA_6747
15111 15112 15113 15114 15115
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.5 -0.8 N.D. -1.4
auxotrophy YNB Glucose 75mM Methionine -0.8 -0.0 -0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.3 -0.2 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.1 -0.1 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.1 +0.3 N.D. -0.4
growth on ypd YPD -1.0 +0.4 +0.4 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 -0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.3 +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 +0.7 +0.4 N.D. -0.3
auxotrophy Dropout Complete -0.1 +0.1 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.5 +0.1 N.D. -0.3
growth on oleic acid YNB Glucose -0.0 +0.1 +0.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.2 +0.4 N.D. +0.3
auxotrophy YNB Glucose -0.2 +0.3 +0.5 N.D. -0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.1 -0.1 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.7 +0.6 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.1 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 +0.1 +0.1 N.D. +0.2
remove
mRNA_6743
plot
remove
mRNA_6744
plot
remove
mRNA_6745
remove
mRNA_6746
plot
remove
mRNA_6747
plot