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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15111 and 15112 are separated by 127 nucleotides
15112 and 15113 are separated by 107 nucleotides
15113 and 15114 are separated by 117 nucleotides
15114 and 15115 are separated by 146 nucleotides
mRNA_6743: 15111 - K06671 STAG1_2, SCC3, IRR1 cohesin complex subunit SA-1/2, at 41,896 to 46,673
15111
mRNA_6744: 15112 - KOG0813 Glyoxylase, at 46,801 to 48,312
15112
mRNA_6745: 15113 - HMMPfam-Uncharacterised conserved protein (DUF2315)-PF10231, at 48,420 to 49,672
15113
mRNA_6746: 15114 - KOG3381 Uncharacterized conserved protein, at 49,790 to 50,693
15114
mRNA_6747: 15115 - Hypothetical Protein, at 50,840 to 52,306
15115
Group
Condition
mRNA
_6743
mRNA
_6744
mRNA
_6745
mRNA
_6746
mRNA
_6747
15111
15112
15113
15114
15115
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.5
-0.8
N.D.
-1.4
auxotrophy
YNB Glucose 75mM Methionine
-0.8
-0.0
-0.0
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.2
-0.1
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.3
-0.2
N.D.
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
+0.1
-0.1
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.1
+0.3
N.D.
-0.4
growth on ypd
YPD
-1.0
+0.4
+0.4
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.0
-0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+0.3
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
+0.7
+0.4
N.D.
-0.3
auxotrophy
Dropout Complete
-0.1
+0.1
+0.2
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.5
+0.1
N.D.
-0.3
growth on oleic acid
YNB Glucose
-0.0
+0.1
+0.2
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.2
+0.4
N.D.
+0.3
auxotrophy
YNB Glucose
-0.2
+0.3
+0.5
N.D.
-0.4
growth on oleic acid
YNB Oleic Acid
+0.0
-0.1
-0.1
N.D.
+0.4
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
+0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.7
+0.6
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.1
+0.1
N.D.
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.2
+0.1
+0.1
N.D.
+0.2
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