Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15117 and 15118 are separated by 238 nucleotides15118 and 15119 are separated by 77 nucleotides15119 and 15120 are separated by 219 nucleotides15120 and 15121 are separated by 1012 nucleotides mRNA_6749: 15117 - Hypothetical Protein, at 54,204 to 55,988 15117 mRNA_6750: 15118 - SUPERFAMILY--SSF47473, at 56,227 to 57,172 15118 mRNA_6751: 15119 - K10578 UBE2J1, NCUBE1, UBC6 ubiquitin-conjugating enzyme E2 J1, at 57,250 to 58,945 15119 mRNA_6752: 15120 - Hypothetical Protein, at 59,165 to 59,914 15120 mRNA_6753: 15121 - K00999 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase, at 60,927 to 62,479 15121
Group Condition mRNA_6749 mRNA_6750 mRNA_6751 mRNA_6752 mRNA_6753
15117 15118 15119 15120 15121
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.3 -0.2 -1.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.4 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 +0.0 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 -0.1 -0.2 N.D.
auxotrophy Dropout Complete +0.0 +0.1 +0.0 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 +0.0 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.2 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.2 -0.4 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0 -0.3 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.0 +0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 +0.2 -0.4 N.D.
auxotrophy YNB Glucose +0.1 +0.2 -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 -0.0 +0.2 N.D.
growth on oleic acid YNB Glucose -0.1 +0.3 -0.0 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 +0.4 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 +0.1 +0.5 N.D.
growth on ypd YPD +0.2 -0.2 +0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.1 +0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.5 +0.8 -0.7 N.D.
remove
mRNA_6749
plot
remove
mRNA_6750
plot
remove
mRNA_6751
remove
mRNA_6752
plot
remove
mRNA_6753
plot