Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15121 and 15122 are separated by 188 nucleotides15122 and 15123 are separated by 157 nucleotides15123 and 15124 are separated by 121 nucleotides15124 and 15125 are separated by 420 nucleotides mRNA_6753: 15121 - K00999 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase, at 60,927 to 62,479 15121 mRNA_6754: 15122 - K15542 PFS2 polyadenylation factor subunit 2, at 62,668 to 65,062 15122 mRNA_6755: 15123 - K14319 RANGAP1 Ran GTPase-activating protein 1, at 65,220 to 66,894 15123 mRNA_6756: 15124 - K02906 RP-L3, MRPL3, rplC large subunit ribosomal protein L3, at 67,016 to 68,273 15124 mRNA_6757: 15125 - K11838 USP7, UBP15 ubiquitin carboxyl-terminal hydrolase 7, at 68,694 to 73,091 15125
Group Condition mRNA_6753 mRNA_6754 mRNA_6755 mRNA_6756 mRNA_6757
15121 15122 15123 15124 15125
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. -1.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. N.D. -0.8
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. -0.3
growth on oleic acid YNB Glucose N.D. N.D. N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. N.D. -0.2
growth on ypd YPD N.D. N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. N.D. +0.1
auxotrophy YNB Glucose N.D. N.D. N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. N.D. +0.4
auxotrophy Dropout Complete N.D. N.D. N.D. N.D. +0.6
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. N.D. +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. N.D. +0.9
remove
mRNA_6753
plot		 remove
mRNA_6754
plot		 remove
mRNA_6755		 remove
mRNA_6756
plot		 remove
mRNA_6757
plot