Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15123 and 15124 are separated by 121 nucleotides15124 and 15125 are separated by 420 nucleotides15125 and 15126 are separated by 803 nucleotides15126 and 15127 are separated by 393 nucleotides mRNA_6755: 15123 - K14319 RANGAP1 Ran GTPase-activating protein 1, at 65,220 to 66,894 15123 mRNA_6756: 15124 - K02906 RP-L3, MRPL3, rplC large subunit ribosomal protein L3, at 67,016 to 68,273 15124 mRNA_6757: 15125 - K11838 USP7, UBP15 ubiquitin carboxyl-terminal hydrolase 7, at 68,694 to 73,091 15125 mRNA_6758: 15126 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 73,895 to 75,434 15126 mRNA_6759: 15127 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 75,828 to 77,290 15127
Group Condition mRNA_6755 mRNA_6756 mRNA_6757 mRNA_6758 mRNA_6759
15123 15124 15125 15126 15127
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.4 +0.7 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.3 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.8 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.4 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.3 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.2 -0.2
growth on oleic acid YNB Glucose N.D. N.D. -0.2 -0.0 -0.0
growth on ypd YPD N.D. N.D. -0.1 +0.6 -0.7
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 +0.3 +0.0
auxotrophy YNB Glucose N.D. N.D. +0.2 -0.4 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.1 -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.4 -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.0 +0.2 +0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.4 +0.0 +0.2
auxotrophy Dropout Complete N.D. N.D. +0.6 -0.2 +0.4
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.9 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.9 -0.2 +0.3
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