Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15125 and 15126 are separated by 803 nucleotides15126 and 15127 are separated by 393 nucleotides15127 and 15128 are separated by 341 nucleotides15128 and 15129 are separated by 304 nucleotides mRNA_6757: 15125 - K11838 USP7, UBP15 ubiquitin carboxyl-terminal hydrolase 7, at 68,694 to 73,091 15125 mRNA_6758: 15126 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 73,895 to 75,434 15126 mRNA_6759: 15127 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 75,828 to 77,290 15127 mRNA_6760: 15128 - Hypothetical Protein, at 77,632 to 78,666 15128 mRNA_6761: 15129 - K00944 AK3 nucleoside-triphosphate--adenylate kinase, at 78,971 to 80,180 15129
Group Condition mRNA_6757 mRNA_6758 mRNA_6759 mRNA_6760 mRNA_6761
15125 15126 15127 15128 15129
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -0.2 N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.1 -0.0 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 +0.7 -0.5 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.1 -0.3 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.2 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 -0.1 N.D. -0.0
growth on ypd YPD -0.1 +0.6 -0.7 N.D. -0.1
growth on oleic acid YNB Glucose -0.2 -0.0 -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.3 -0.4 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.4 +0.3 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.3 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 -0.2 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 +0.0 N.D. +0.1
auxotrophy YNB Glucose +0.2 -0.4 +0.5 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.4 +0.0 +0.2 N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.9 -0.2 +0.2 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 +0.3 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 -0.2 +0.3 N.D. -0.1
auxotrophy Dropout Complete +0.6 -0.2 +0.4 N.D. +0.1
remove
mRNA_6757
plot
remove
mRNA_6758
plot
remove
mRNA_6759
remove
mRNA_6760
plot
remove
mRNA_6761
plot