Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15134 and 15135 are separated by 123 nucleotides15135 and 15136 are separated by 180 nucleotides15136 and 15137 are separated by 310 nucleotides15137 and 15138 are separated by 258 nucleotides mRNA_6766: 15134 - HMMPfam-PIG-X / PBN1-PF08320,SMART-PIG-X / PBN1-SM00780, at 88,175 to 88,997 15134 mRNA_6767: 15135 - KOG0393 Ras-related small GTPase, Rho type, at 89,121 to 90,132 15135 mRNA_6768: 15136 - HMMPfam-DNA repair protein endonuclease SAE2/CtIP C-terminus-PF08573, at 90,313 to 94,205 15136 mRNA_6769: 15137 - K01953 asnB, ASNS asparagine synthase (glutamine-hydrolysing), at 94,516 to 96,583 15137 mRNA_6770: 15138 - K03350 APC3, CDC27 anaphase-promoting complex subunit 3, at 96,842 to 100,028 15138
Group Condition mRNA_6766 mRNA_6767 mRNA_6768 mRNA_6769 mRNA_6770
15134 15135 15136 15137 15138
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.6 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.9 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.8 N.D. N.D.
growth on ypd YPD N.D. N.D. -0.8 N.D. N.D.
auxotrophy Dropout Complete N.D. N.D. -0.7 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 N.D. N.D.
auxotrophy YNB Glucose N.D. N.D. -0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. N.D. -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.5 N.D. N.D.
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