Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15138 and 15139 are separated by 965 nucleotides15139 and 15140 are separated by 841 nucleotides15140 and 15141 are separated by 359 nucleotides15141 and 15142 are separated by 169 nucleotides mRNA_6770: 15138 - K03350 APC3, CDC27 anaphase-promoting complex subunit 3, at 96,842 to 100,028 15138 mRNA_6771: 15139 - Hypothetical Protein, at 100,994 to 101,449 15139 mRNA_6772: 15140 - KOG0202 Ca2+ transporting ATPase, at 102,291 to 102,787 15140 mRNA_6773: 15141 - HMMPfam-Cation transporter/ATPase, N-terminus-PF00690,SUPERFAMILY--SSF81665, at 103,147 to 103,439 15141 mRNA_6774: 15142 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 103,609 to 104,047 15142
Group Condition mRNA_6770 mRNA_6771 mRNA_6772 mRNA_6773 mRNA_6774
15138 15139 15140 15141 15142
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.9 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 -0.8 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.6 -0.5 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.5 -1.4 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -0.7 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -1.1 +0.6 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.7 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.4 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.2 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.0 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 -0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.7 -0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.6 +1.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +1.0 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 +0.7 N.D. N.D.
auxotrophy YNB Glucose N.D. +1.7 +0.2 N.D. N.D.
growth on ypd YPD N.D. +3.1 +1.1 N.D. N.D.
remove
mRNA_6770
plot		 remove
mRNA_6771
plot		 remove
mRNA_6772		 remove
mRNA_6773
plot		 remove
mRNA_6774
plot