Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15141 and 15142 are separated by 169 nucleotides
15142 and 15143 are separated by 143 nucleotides
15143 and 15144 are separated by 1221 nucleotides
15144 and 15145 are separated by 286 nucleotides
mRNA_6773: 15141 - HMMPfam-Cation transporter/ATPase, N-terminus-PF00690,SUPERFAMILY--SSF81665, at 103,147 to 103,439
15141
mRNA_6774: 15142 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 103,609 to 104,047
15142
mRNA_6775: 15143 - K14784 CMS1 protein CMS1, at 104,191 to 105,444
15143
mRNA_6776: 15144 - KOG1183 N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis, at 106,666 to 108,156
15144
mRNA_6777: 15145 - Hypothetical Protein, at 108,443 to 109,222
15145
Group
Condition
mRNA
_6773
mRNA
_6774
mRNA
_6775
mRNA
_6776
mRNA
_6777
15141
15142
15143
15144
15145
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-2.0
+0.5
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.6
+0.3
-1.5
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-2.1
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.0
-0.3
-1.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
-2.0
+0.2
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.4
+0.1
-0.6
growth on ypd
YPD
N.D.
N.D.
-0.8
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.2
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
+0.0
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-1.3
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+1.3
-0.3
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.2
+0.2
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-1.1
+0.3
+0.7
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.3
-0.3
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.7
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.8
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.5
+0.0
+0.1
auxotrophy
YNB Glucose
N.D.
N.D.
+0.9
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+1.9
-0.2
+0.1
auxotrophy
Dropout Complete
N.D.
N.D.
+3.0
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+1.9
+0.1
+0.9
remove
mRNA_6773
plot
remove
mRNA_6774
plot
remove
mRNA_6775
remove
mRNA_6776
plot
remove
mRNA_6777
plot