Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15143 and 15144 are separated by 1221 nucleotides15144 and 15145 are separated by 286 nucleotides15145 and 15146 are separated by 3833 nucleotides15146 and 15147 are separated by 67 nucleotides mRNA_6775: 15143 - K14784 CMS1 protein CMS1, at 104,191 to 105,444 15143 mRNA_6776: 15144 - KOG1183 N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis, at 106,666 to 108,156 15144 mRNA_6777: 15145 - Hypothetical Protein, at 108,443 to 109,222 15145 mRNA_6778: 15146 - K00565 RNMT mRNA (guanine-N7-)-methyltransferase, at 113,056 to 114,676 15146 mRNA_6779: 15147 - K10998 CSM3, SWI3 replication fork protection complex subunit Csm3/Swi3, at 114,744 to 115,894 15147
Group Condition mRNA_6775 mRNA_6776 mRNA_6777 mRNA_6778 mRNA_6779
15143 15144 15145 15146 15147
ypd buoyancy 40 hrs No Buoyancy Separation -2.0 +0.5 -1.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.3 -1.5 N.D. N.D.
growth on oleic acid YNB Oleic Acid -2.1 +0.2 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.3 -1.2 N.D. N.D.
growth on oleic acid YNB Glucose -2.0 +0.2 +0.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.1 -0.6 N.D. N.D.
growth on ypd YPD -0.8 +0.2 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.4 -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 -0.7 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 +0.7 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.3 -0.3 -1.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -1.1 +0.3 +0.7 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 +0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.7 -0.2 -0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.8 +0.0 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.0 +0.1 N.D. N.D.
auxotrophy YNB Glucose +0.9 +0.3 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +1.9 -0.2 +0.1 N.D. N.D.
auxotrophy Dropout Complete +3.0 -0.2 -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +1.9 +0.1 +0.9 N.D. N.D.
remove
mRNA_6775
plot
remove
mRNA_6776
plot
remove
mRNA_6777
remove
mRNA_6778
plot
remove
mRNA_6779
plot