Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15149 and 15150 are separated by 81 nucleotides15150 and 15151 are separated by 240 nucleotides15151 and 15152 are separated by 220 nucleotides15152 and 15153 are separated by 286 nucleotides mRNA_6781: 15149 - Hypothetical Protein, at 117,280 to 117,859 15149 mRNA_6782: 15150 - HMMPfam-Man1-Src1p-C-terminal domain-PF09402,HMMPfam-HeH/LEM domain-PF12949, at 117,941 to 121,019 15150 mRNA_6783: 15151 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 121,260 to 121,958 15151 mRNA_6784: 15152 - Hypothetical Protein, at 122,179 to 122,986 15152 mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123,273 to 125,638 15153
Group Condition mRNA_6781 mRNA_6782 mRNA_6783 mRNA_6784 mRNA_6785
15149 15150 15151 15152 15153
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.2 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 +0.0 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 +0.1 -1.0 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.0 -0.8 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 +0.3 -0.7 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.6 +0.4 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.1 -0.8 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 +0.1 +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 +0.0 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.2 +0.6 -0.3
auxotrophy Dropout Complete N.D. -0.3 +0.5 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 +0.1 +0.2 +0.3
auxotrophy YNB Glucose N.D. -0.5 +0.4 +0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.5 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +0.2 +0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.1 +0.4 +0.2
growth on ypd YPD N.D. +0.9 +0.7 -0.4 -0.3
growth on oleic acid YNB Glucose N.D. +0.2 +0.3 +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.9 -0.2 +0.4 +0.0
remove
mRNA_6781
plot
remove
mRNA_6782
plot
remove
mRNA_6783
remove
mRNA_6784
plot
remove
mRNA_6785
plot