Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15150 and 15151 are separated by 240 nucleotides15151 and 15152 are separated by 220 nucleotides15152 and 15153 are separated by 286 nucleotides15153 and 15154 are separated by 349 nucleotides mRNA_6782: 15150 - HMMPfam-Man1-Src1p-C-terminal domain-PF09402,HMMPfam-HeH/LEM domain-PF12949, at 117,941 to 121,019 15150 mRNA_6783: 15151 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 121,260 to 121,958 15151 mRNA_6784: 15152 - Hypothetical Protein, at 122,179 to 122,986 15152 mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123,273 to 125,638 15153 mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125,988 to 127,224 15154
Group Condition mRNA_6782 mRNA_6783 mRNA_6784 mRNA_6785 mRNA_6786
15150 15151 15152 15153 15154
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.1 -1.0 +0.3 -2.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 +0.3 -0.4 -1.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.3 -0.7 +0.1 -1.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.2 -0.3 -0.2 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.4 +0.2 -2.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.0 -0.5 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 -0.8 +0.0 -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.0 -0.1 +0.1 -1.5
auxotrophy Dropout Complete -0.3 +0.5 -0.3 +0.3 -1.4
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.4 -0.4 -0.0 -0.3
growth on oleic acid YNB Oleic Acid +0.5 +0.2 -0.2 -0.1 -1.1
growth on ricinoleic acid YNB Glucose -0.2 +0.0 -0.8 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.2 +0.4 +0.2 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.2 -0.4 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 +0.2 +0.3 -0.4
growth on oleic acid YNB Glucose +0.2 +0.3 +0.2 +0.2 -0.9
auxotrophy YNB Glucose -0.5 +0.4 +0.1 +0.2 -0.2
growth on ypd YPD +0.9 +0.7 -0.4 -0.3 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.6 -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.3 -0.1 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.9 -0.2 +0.4 +0.0 +1.3
remove
mRNA_6782
plot
remove
mRNA_6783
plot
remove
mRNA_6784
remove
mRNA_6785
plot
remove
mRNA_6786
plot